Table: ndb.repositoryspecimens#
Description#
This table lists the repositories in which fossil specimens have been accessioned or reposited. The inventory in Neotoma is by Dataset, which is the collection of specimens from a Collection Unit. Occasionally, specimens from a single Collection Unit have been reposited at different institutions, in which case multiple records for that Dataset occur in the table.
TODO: Expand this description with: - What data does this table store? - What is the business/research purpose? - How is this data collected or generated? - Are there any important caveats or data quality issues?
Table Structure#
Schema: ndb | Table Comment: This table lists the repositories in which fossil specimens have been accessioned or reposited. The inventory in Neotoma is by Dataset, which is the collection of specimens from a Collection Unit. Occasionally, specimens from a single Collection Unit have been reposited at different institutions, in which case multiple records for that Dataset occur in the table.
Statistics#
| Metric | Value |
|---|---|
| Row Count | 7,104 |
| Total Size | 2144 kB |
| Table Size | 416 kB |
| Indexes Size | 1696 kB |
Relationships#
Primary Key: datasetid, repositoryid
Foreign Keys:
datasetid→datasets.datasetidrepositoryid→repositoryinstitutions.repositoryid
Referenced By:
TODO: Document which tables reference this table (will be auto-detected in validation).
Data Dictionary#
| Column | Type | Nullable | Default | Constraints | Description |
|---|---|---|---|---|---|
datasetid |
integer | ✗ | - |
FOREIGN KEY, PRIMARY KEY | Dataset identification number. Field links to the Datasets table. |
repositoryid |
integer | ✗ | - |
FOREIGN KEY, PRIMARY KEY | Repository identification number. Field links to the RepositoryInstitutions lookup table. |
notes |
text | ✓ | - |
- | Free form notes or comments about the disposition of the specimens. |
recdatecreated |
timestamp without time zone | ✗ | timezone('UTC'::text, now()) |
- | |
recdatemodified |
timestamp without time zone | ✗ | - |
- |
TODO: Review column descriptions and add comments where missing.
Usage Examples#
Example 1: Basic Selection#
-- Get recent records from repositoryspecimens
SELECT *
FROM repositoryspecimens
ORDER BY datasetid DESC
LIMIT 10;
Purpose: Retrieve the 10 most recent records from repositoryspecimens
Example 2: Count Records#
Purpose: Get the total number of records in repositoryspecimens
Example 3: Filter by Date Range#
-- Get records within a date range
SELECT *
FROM repositoryspecimens
WHERE recdatecreated >= '2024-01-01'
AND recdatecreated < '2025-01-01'
ORDER BY recdatecreated DESC;
Purpose: Retrieve records from repositoryspecimens within a specific date range
Example 4: Join with datasets#
-- Join with related table
SELECT
t1.*,
t2.*
FROM repositoryspecimens t1
INNER JOIN datasets t2
ON t1.datasetid = t2.datasetid
LIMIT 100;
Purpose: Retrieve repositoryspecimens records with related data from datasets
Example 5: Aggregate Data#
-- Aggregate records by repositoryid
SELECT
repositoryid,
COUNT(*) as count
FROM repositoryspecimens
GROUP BY repositoryid
ORDER BY count DESC
LIMIT 10;
Purpose: Count records grouped by repositoryid
TODO: Add more specific examples relevant to common research questions or operational tasks.
Data Quality Notes#
TODO: Document: - Known data quality issues - Validation rules - Expected data ranges - Update frequency and mechanisms - Any ETL processes that populate this table
Maintenance#
- Data Owner: TODO: Assign owner
- Update Frequency: TODO: Document frequency
- Last Major Schema Change: TODO: Document when schema last changed
Related Documentation#
TODO: Link to: - Related API endpoints - Data collection procedures - Analysis notebooks or reports that use this table - External ontologies or standards